Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS4Q8IUM7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AL607033.1-201ENST00000623900 1599 ntBASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AC079316.1-201ENST00000548397 411 ntBASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AL606495.2-201ENST00000605867 535 ntBASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 MIR6787-201ENST00000616675 61 ntBASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AC012313.1-201ENST00000593393 3059 ntBASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS4Q8IUM7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 KRT8P44-201ENST00000441609 1350 ntBASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 AC106760.1-201ENST00000508690 800 ntBASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS4Q8IUM7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 AC106886.4-201ENST00000623557 2502 ntBASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS4Q8IUM7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPAS4Q8IUM7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms