Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 AC009477.1-201ENST00000452936 217 ntBASIC17.07■□□□□ 0.32
VSTM1Q6UX27 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 SERBP1P3-201ENST00000459980 809 ntBASIC17.07■□□□□ 0.32
VSTM1Q6UX27 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 REXO1L8P-201ENST00000604378 1897 ntBASIC17.07■□□□□ 0.32
VSTM1Q6UX27 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VSTM1Q6UX27 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.06■□□□□ 0.32
VSTM1Q6UX27 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 MRPS18AP1-201ENST00000414458 589 ntBASIC17.06■□□□□ 0.32
VSTM1Q6UX27 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 ZNF890P-202ENST00000530367 1156 ntBASIC17.06■□□□□ 0.32
VSTM1Q6UX27 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 AL844908.2-201ENST00000609461 460 ntBASIC17.06■□□□□ 0.32
VSTM1Q6UX27 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 AL603832.2-201ENST00000566195 2125 ntBASIC17.06■□□□□ 0.32
VSTM1Q6UX27 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 DBET-201ENST00000630918 3363 ntBASIC17.06■□□□□ 0.32
VSTM1Q6UX27 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VSTM1Q6UX27 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 AC002472.2-201ENST00000442739 958 ntBASIC17.05■□□□□ 0.32
VSTM1Q6UX27 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 RN7SL204P-201ENST00000582831 262 ntBASIC17.05■□□□□ 0.32
VSTM1Q6UX27 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VSTM1Q6UX27 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms