Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RNPS1P1-201ENST00000507437 918 ntBASIC14.1□□□□□ -0.15
C11orf88Q6PI97 STK19B-204ENST00000512515 211 ntBASIC14.1□□□□□ -0.15
C11orf88Q6PI97 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 STK25P1-201ENST00000585406 838 ntBASIC14.1□□□□□ -0.15
C11orf88Q6PI97 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.1□□□□□ -0.15
C11orf88Q6PI97 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
C11orf88Q6PI97 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 ABCD1P5-201ENST00000445663 754 ntBASIC14.09□□□□□ -0.15
C11orf88Q6PI97 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 MTDHP3-201ENST00000594186 672 ntBASIC14.09□□□□□ -0.15
C11orf88Q6PI97 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 AL135999.2-201ENST00000622438 1686 ntBASIC14.09□□□□□ -0.15
C11orf88Q6PI97 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 AC006449.6-201ENST00000612330 2296 ntBASIC14.09□□□□□ -0.15
C11orf88Q6PI97 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PPT1-215ENST00000641471 2368 ntBASIC14.09□□□□□ -0.15
C11orf88Q6PI97 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C11orf88Q6PI97 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.15
C11orf88Q6PI97 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C11orf88Q6PI97 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms