Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AC026396.1-201ENST00000419388 421 ntBASIC15.66■□□□□ 0.1
SGO1Q5FBB7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AC106730.1-201ENST00000566722 1090 ntBASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AL138918.1-201ENST00000568306 659 ntBASIC15.66■□□□□ 0.1
SGO1Q5FBB7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.66■□□□□ 0.1
SGO1Q5FBB7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 PCDHA3-202ENST00000532566 4594 ntBASIC15.65■□□□□ 0.1
SGO1Q5FBB7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 AC112191.1-201ENST00000523689 701 ntBASIC15.65■□□□□ 0.1
SGO1Q5FBB7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SGO1Q5FBB7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
SGO1Q5FBB7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SGO1Q5FBB7 AL591424.1-201ENST00000442569 1213 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms