Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 AJ011931.1-201ENST00000618749 2492 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 AC148477.4-201ENST00000613430 1793 ntBASIC13.6□□□□□ -0.23
SSBP1Q04837 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 AC097376.2-205ENST00000610159 5334 ntBASIC13.6□□□□□ -0.23
SSBP1Q04837 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SSBP1Q04837 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 LINC00265-3P-201ENST00000447588 903 ntBASIC13.6□□□□□ -0.23
SSBP1Q04837 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.6□□□□□ -0.23
SSBP1Q04837 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.6□□□□□ -0.23
SSBP1Q04837 AP002469.2-201ENST00000531724 424 ntBASIC13.6□□□□□ -0.23
SSBP1Q04837 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 ZBED1P1-201ENST00000502364 1930 ntBASIC13.6□□□□□ -0.23
SSBP1Q04837 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 AL161772.1-201ENST00000610494 4412 ntBASIC13.6□□□□□ -0.23
SSBP1Q04837 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.6□□□□□ -0.23
SSBP1Q04837 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.6□□□□□ -0.23
SSBP1Q04837 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SSBP1Q04837 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.59□□□□□ -0.23
SSBP1Q04837 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.59□□□□□ -0.23
SSBP1Q04837 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.59□□□□□ -0.23
SSBP1Q04837 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SSBP1Q04837 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SSBP1Q04837 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.59□□□□□ -0.23
SSBP1Q04837 RNU1-129P-201ENST00000384064 167 ntBASIC13.59□□□□□ -0.23
SSBP1Q04837 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.59□□□□□ -0.23
SSBP1Q04837 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SSBP1Q04837 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.59□□□□□ -0.23
SSBP1Q04837 AC012615.1-201ENST00000565797 1299 ntBASIC13.59□□□□□ -0.23
SSBP1Q04837 U1.21-201ENST00000580816 167 ntBASIC13.59□□□□□ -0.23
SSBP1Q04837 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SSBP1Q04837 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SSBP1Q04837 AL121956.5-201ENST00000625261 221 ntBASIC13.59□□□□□ -0.23
SSBP1Q04837 AC133561.5-201ENST00000635547 218 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms