Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.48□□□□□ -0.57
UBE2D3P61077 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.48□□□□□ -0.57
UBE2D3P61077 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBE2D3P61077 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
UBE2D3P61077 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 AC092919.2-201ENST00000623631 1645 ntBASIC11.47□□□□□ -0.57
UBE2D3P61077 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
UBE2D3P61077 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2D3P61077 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2D3P61077 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 HCG4B-203ENST00000450128 991 ntBASIC11.47□□□□□ -0.57
UBE2D3P61077 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.47□□□□□ -0.57
UBE2D3P61077 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2D3P61077 AC096734.2-201ENST00000562054 433 ntBASIC11.47□□□□□ -0.57
UBE2D3P61077 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 AC116407.3-201ENST00000623905 1129 ntBASIC11.47□□□□□ -0.57
UBE2D3P61077 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D3P61077 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
UBE2D3P61077 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 NORAD-201ENST00000565493 5339 ntBASIC11.47□□□□□ -0.57
UBE2D3P61077 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D3P61077 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D3P61077 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D3P61077 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D3P61077 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D3P61077 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UBE2D3P61077 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D3P61077 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D3P61077 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2D3P61077 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D3P61077 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D3P61077 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D3P61077 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D3P61077 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D3P61077 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UBE2D3P61077 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms