Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 AC099521.3-201ENST00000624251 2938 ntBASIC11.35□□□□□ -0.59
CKS1BP61024 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS1BP61024 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS1BP61024 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS1BP61024 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CKS1BP61024 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CKS1BP61024 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
CKS1BP61024 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS1BP61024 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CKS1BP61024 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.34□□□□□ -0.59
CKS1BP61024 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CKS1BP61024 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
CKS1BP61024 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.34□□□□□ -0.59
CKS1BP61024 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.34□□□□□ -0.59
CKS1BP61024 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.34□□□□□ -0.59
CKS1BP61024 AL596275.1-201ENST00000423464 877 ntBASIC11.34□□□□□ -0.59
CKS1BP61024 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.34□□□□□ -0.59
CKS1BP61024 KRT18P38-201ENST00000449496 1282 ntBASIC11.34□□□□□ -0.59
CKS1BP61024 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.34□□□□□ -0.59
CKS1BP61024 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
CKS1BP61024 AC092364.2-201ENST00000596710 2692 ntBASIC11.34□□□□□ -0.59
CKS1BP61024 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
CKS1BP61024 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
CKS1BP61024 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
CKS1BP61024 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.34□□□□□ -0.59
CKS1BP61024 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS1BP61024 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS1BP61024 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS1BP61024 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.33□□□□□ -0.59
CKS1BP61024 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
CKS1BP61024 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
CKS1BP61024 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CKS1BP61024 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.33□□□□□ -0.6
CKS1BP61024 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
CKS1BP61024 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS1BP61024 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CKS1BP61024 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms