Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH8P55286 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDH8P55286 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CDH8P55286 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH8P55286 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH8P55286 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH8P55286 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH8P55286 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH8P55286 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH8P55286 AC011477.6-201ENST00000604980 1927 ntBASIC17.08■□□□□ 0.32
CDH8P55286 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH8P55286 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDH8P55286 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDH8P55286 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 MRPS18AP1-201ENST00000414458 589 ntBASIC17.07■□□□□ 0.32
CDH8P55286 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH8P55286 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH8P55286 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 AL512638.1-201ENST00000457493 794 ntBASIC17.07■□□□□ 0.32
CDH8P55286 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH8P55286 AC009407.1-201ENST00000568958 598 ntBASIC17.07■□□□□ 0.32
CDH8P55286 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 AC011467.4-201ENST00000594891 528 ntBASIC17.07■□□□□ 0.32
CDH8P55286 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH8P55286 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 PAUPAR-201ENST00000630360 2965 ntBASIC17.07■□□□□ 0.32
CDH8P55286 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH8P55286 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH8P55286 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH8P55286 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH8P55286 FO393414.2-201ENST00000405153 598 ntBASIC17.06■□□□□ 0.32
CDH8P55286 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH8P55286 PHKG1P2-201ENST00000457537 863 ntBASIC17.06■□□□□ 0.32
CDH8P55286 INGX-202ENST00000489074 768 ntBASIC17.06■□□□□ 0.32
CDH8P55286 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH8P55286 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 AC044860.1-202ENST00000559481 777 ntBASIC17.06■□□□□ 0.32
CDH8P55286 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDH8P55286 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH8P55286 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH8P55286 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDH8P55286 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDH8P55286 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CDH8P55286 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH8P55286 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH8P55286 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms