Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.42■□□□□ 0.06
EPHA4P54764 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
EPHA4P54764 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.42■□□□□ 0.06
EPHA4P54764 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
EPHA4P54764 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA4P54764 AGGF1P2-201ENST00000426656 2106 ntBASIC15.41■□□□□ 0.06
EPHA4P54764 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
EPHA4P54764 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA4P54764 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA4P54764 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 CHCHD2P3-201ENST00000603038 451 ntBASIC15.41■□□□□ 0.06
EPHA4P54764 AC093726.1-201ENST00000608064 963 ntBASIC15.41■□□□□ 0.06
EPHA4P54764 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 AC007431.3-201ENST00000623221 587 ntBASIC15.41■□□□□ 0.06
EPHA4P54764 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.41■□□□□ 0.06
EPHA4P54764 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
EPHA4P54764 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.41■□□□□ 0.06
EPHA4P54764 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA4P54764 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA4P54764 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
EPHA4P54764 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA4P54764 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
EPHA4P54764 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA4P54764 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA4P54764 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.4■□□□□ 0.06
EPHA4P54764 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA4P54764 AL589987.1-201ENST00000453380 819 ntBASIC15.4■□□□□ 0.06
EPHA4P54764 AC011495.1-201ENST00000498085 584 ntBASIC15.4■□□□□ 0.06
EPHA4P54764 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.4■□□□□ 0.06
EPHA4P54764 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
EPHA4P54764 RARRES2P5-201ENST00000564013 466 ntBASIC15.4■□□□□ 0.06
EPHA4P54764 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA4P54764 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
EPHA4P54764 AC008494.3-201ENST00000606615 944 ntBASIC15.4■□□□□ 0.06
EPHA4P54764 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.4■□□□□ 0.06
EPHA4P54764 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
EPHA4P54764 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.4■□□□□ 0.06
EPHA4P54764 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
EPHA4P54764 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EPHA4P54764 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms