Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.98□□□□□ -0.01
RNF144AP50876 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.98□□□□□ -0.01
RNF144AP50876 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 MTDHP5-201ENST00000598980 586 ntBASIC14.98□□□□□ -0.01
RNF144AP50876 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
RNF144AP50876 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.98□□□□□ -0.01
RNF144AP50876 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.98□□□□□ -0.01
RNF144AP50876 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RNF144AP50876 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
RNF144AP50876 DBET-201ENST00000630918 3363 ntBASIC14.98□□□□□ -0.01
RNF144AP50876 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF144AP50876 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF144AP50876 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.97□□□□□ -0.01
RNF144AP50876 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 AC112482.1-201ENST00000492080 688 ntBASIC14.97□□□□□ -0.01
RNF144AP50876 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF144AP50876 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF144AP50876 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF144AP50876 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF144AP50876 AC026120.1-201ENST00000611536 926 ntBASIC14.97□□□□□ -0.01
RNF144AP50876 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RNF144AP50876 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 AC126177.1-201ENST00000547829 2218 ntBASIC14.97□□□□□ -0.01
RNF144AP50876 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF144AP50876 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF144AP50876 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF144AP50876 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF144AP50876 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.96□□□□□ -0.01
RNF144AP50876 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF144AP50876 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RNF144AP50876 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RNF144AP50876 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RNF144AP50876 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF144AP50876 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF144AP50876 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms