Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 UGT1A8-201ENST00000373450 2407 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 ZNF75D-201ENST00000370764 2977 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 AP003355.2-201ENST00000605923 2622 ntBASIC10.73□□□□□ -0.69
PCP4P48539 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 MPPE1-202ENST00000317235 2324 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
PCP4P48539 C8A-201ENST00000361249 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 LTF-201ENST00000231751 2979 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
PCP4P48539 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC10.73□□□□□ -0.69
PCP4P48539 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC10.73□□□□□ -0.69
PCP4P48539 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 EGLN3-205ENST00000547327 2849 ntBASIC10.72□□□□□ -0.69
PCP4P48539 PELI1-201ENST00000358912 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 PCDHGB8P-202ENST00000507007 2873 ntBASIC10.72□□□□□ -0.69
PCP4P48539 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.72□□□□□ -0.69
PCP4P48539 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 C2-209ENST00000452323 1999 ntTSL 2 BASIC10.72□□□□□ -0.69
PCP4P48539 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC10.72□□□□□ -0.69
PCP4P48539 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
PCP4P48539 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
PCP4P48539 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 RCAN1-202ENST00000381132 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 CTBP1-AS2-202ENST00000505364 2423 ntTSL 2 BASIC10.72□□□□□ -0.69
PCP4P48539 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC10.72□□□□□ -0.69
PCP4P48539 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PCP4P48539 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms