Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.19■□□□□ 0.18
XPAP23025 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.19■□□□□ 0.18
XPAP23025 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.19■□□□□ 0.18
XPAP23025 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
XPAP23025 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 HAUS4P1-201ENST00000406739 1145 ntBASIC16.19■□□□□ 0.18
XPAP23025 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.19■□□□□ 0.18
XPAP23025 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.19■□□□□ 0.18
XPAP23025 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.19■□□□□ 0.18
XPAP23025 MIR4745-201ENST00000577608 62 ntBASIC16.19■□□□□ 0.18
XPAP23025 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
XPAP23025 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.19■□□□□ 0.18
XPAP23025 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.19■□□□□ 0.18
XPAP23025 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 AC092364.2-201ENST00000596710 2692 ntBASIC16.19■□□□□ 0.18
XPAP23025 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
XPAP23025 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
XPAP23025 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.18■□□□□ 0.18
XPAP23025 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.18■□□□□ 0.18
XPAP23025 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.18■□□□□ 0.18
XPAP23025 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.18■□□□□ 0.18
XPAP23025 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.18■□□□□ 0.18
XPAP23025 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.18■□□□□ 0.18
XPAP23025 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.18■□□□□ 0.18
XPAP23025 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 AC087499.5-201ENST00000452760 1342 ntBASIC16.18■□□□□ 0.18
XPAP23025 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
XPAP23025 CYP4F24P-201ENST00000586049 1580 ntBASIC16.17■□□□□ 0.18
XPAP23025 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 KRT8P12-202ENST00000472924 1397 ntBASIC16.17■□□□□ 0.18
XPAP23025 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
XPAP23025 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
XPAP23025 AL080243.2-201ENST00000418783 582 ntBASIC16.17■□□□□ 0.18
XPAP23025 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.17■□□□□ 0.18
XPAP23025 TSPY16P-201ENST00000449843 468 ntBASIC16.17■□□□□ 0.18
XPAP23025 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
XPAP23025 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
XPAP23025 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.17■□□□□ 0.18
XPAP23025 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.17■□□□□ 0.18
XPAP23025 MIR6069-201ENST00000620069 79 ntBASIC16.17■□□□□ 0.18
XPAP23025 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.17■□□□□ 0.18
XPAP23025 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms