Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF888P0CJ79 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF888P0CJ79 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AC011477.6-201ENST00000604980 1927 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AL365203.3-201ENST00000609742 2057 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 SPDYE17-201ENST00000412399 783 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AC092580.3-201ENST00000430932 139 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 CYMP-203ENST00000474680 1263 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AC097493.3-201ENST00000509725 367 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AL158211.3-201ENST00000607385 239 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 KRT8P12-202ENST00000472924 1397 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 REXO1L1P-202ENST00000608646 1974 ntBASIC15.22■□□□□ 0.03
ZNF888P0CJ79 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF888P0CJ79 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 NFIC-211ENST00000641145 8399 ntBASIC15.21■□□□□ 0.03
ZNF888P0CJ79 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 TEX28P1-201ENST00000613479 1221 ntBASIC15.21■□□□□ 0.03
ZNF888P0CJ79 TEX28P2-201ENST00000617764 1221 ntBASIC15.21■□□□□ 0.03
ZNF888P0CJ79 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF888P0CJ79 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 AC018892.3-201ENST00000623986 2499 ntBASIC15.21■□□□□ 0.02
ZNF888P0CJ79 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF888P0CJ79 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms