Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 PPT1-213ENST00000641319 2388 ntBASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 INGX-201ENST00000359239 846 ntBASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 FAM8A6P-201ENST00000407496 1135 ntBASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ACTG1P4-201ENST00000425123 1122 ntBASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 HLA-F-220ENST00000434407 884 ntBASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 AC132938.5-201ENST00000624980 1813 ntBASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
H2AFB1P0C5Y9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 GPAA1P2-202ENST00000606848 1787 ntBASIC13□□□□□ -0.33
H2AFB1P0C5Y9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 AC125634.1-201ENST00000438758 1403 ntBASIC13□□□□□ -0.33
H2AFB1P0C5Y9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13□□□□□ -0.33
H2AFB1P0C5Y9 AP000525.1-201ENST00000608286 694 ntBASIC13□□□□□ -0.33
H2AFB1P0C5Y9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms