Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.14■□□□□ 0.33
ATP1A1P05023 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ATP1A1P05023 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATP1A1P05023 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP1A1P05023 NORAD-201ENST00000565493 5339 ntBASIC17.14■□□□□ 0.33
ATP1A1P05023 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP1A1P05023 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP1A1P05023 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP1A1P05023 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP1A1P05023 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP1A1P05023 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ATP1A1P05023 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ATP1A1P05023 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 RNU1-129P-201ENST00000384064 167 ntBASIC17.13■□□□□ 0.33
ATP1A1P05023 AC073621.1-201ENST00000392730 636 ntBASIC17.13■□□□□ 0.33
ATP1A1P05023 KRT18P27-201ENST00000427733 1299 ntBASIC17.13■□□□□ 0.33
ATP1A1P05023 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 IGHV3-22-201ENST00000520721 359 ntBASIC17.13■□□□□ 0.33
ATP1A1P05023 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 U1.21-201ENST00000580816 167 ntBASIC17.13■□□□□ 0.33
ATP1A1P05023 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.13■□□□□ 0.33
ATP1A1P05023 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 AL356488.2-201ENST00000602755 427 ntBASIC17.13■□□□□ 0.33
ATP1A1P05023 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 AC117500.6-201ENST00000624871 588 ntBASIC17.13■□□□□ 0.33
ATP1A1P05023 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP1A1P05023 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP1A1P05023 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP1A1P05023 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.12■□□□□ 0.33
ATP1A1P05023 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 AC093724.1-201ENST00000448659 1027 ntBASIC17.12■□□□□ 0.33
ATP1A1P05023 RPL13AP23-201ENST00000480739 586 ntBASIC17.12■□□□□ 0.33
ATP1A1P05023 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 MIR1199-201ENST00000621445 119 ntBASIC17.12■□□□□ 0.33
ATP1A1P05023 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ATP1A1P05023 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ATP1A1P05023 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATP1A1P05023 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
ATP1A1P05023 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP1A1P05023 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP1A1P05023 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP1A1P05023 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP1A1P05023 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP1A1P05023 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATP1A1P05023 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP1A1P05023 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP1A1P05023 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP1A1P05023 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP1A1P05023 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms