Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.63□□□□□ -0.07
P04436 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.63□□□□□ -0.07
P04436 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
P04436 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
P04436 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.63□□□□□ -0.07
P04436 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.63□□□□□ -0.07
P04436 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.63□□□□□ -0.07
P04436 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.63□□□□□ -0.07
P04436 AC027307.3-201ENST00000594262 1100 ntBASIC14.63□□□□□ -0.07
P04436 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.63□□□□□ -0.07
P04436 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.63□□□□□ -0.07
P04436 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.63□□□□□ -0.07
P04436 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.63□□□□□ -0.07
P04436 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.63□□□□□ -0.07
P04436 AL109936.8-201ENST00000641772 604 ntBASIC14.63□□□□□ -0.07
P04436 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
P04436 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.63□□□□□ -0.07
P04436 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.63□□□□□ -0.07
P04436 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.63□□□□□ -0.07
P04436 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 BNIP3P1-202ENST00000550043 1585 ntBASIC14.63□□□□□ -0.07
P04436 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.63□□□□□ -0.07
P04436 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
P04436 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.63□□□□□ -0.07
P04436 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
P04436 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.63□□□□□ -0.07
P04436 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
P04436 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P04436 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 AC092364.2-201ENST00000596710 2692 ntBASIC14.62□□□□□ -0.07
P04436 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.62□□□□□ -0.07
P04436 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.62□□□□□ -0.07
P04436 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
P04436 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
P04436 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
P04436 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
P04436 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.62□□□□□ -0.07
P04436 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.62□□□□□ -0.07
P04436 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
P04436 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.62□□□□□ -0.07
P04436 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.62□□□□□ -0.07
P04436 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
P04436 AC114501.2-201ENST00000439631 535 ntBASIC14.62□□□□□ -0.07
P04436 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.62□□□□□ -0.07
P04436 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.62□□□□□ -0.07
P04436 TIMM17BP1-201ENST00000545713 516 ntBASIC14.62□□□□□ -0.07
P04436 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
P04436 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.62□□□□□ -0.07
P04436 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.62□□□□□ -0.07
P04436 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.62□□□□□ -0.07
P04436 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
P04436 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.62□□□□□ -0.07
P04436 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
P04436 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.62□□□□□ -0.07
P04436 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P04436 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.62□□□□□ -0.07
P04436 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
P04436 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.61□□□□□ -0.07
P04436 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.61□□□□□ -0.07
P04436 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P04436 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms