Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.14■□□□□ 0.33
C4BPAP04003 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.14■□□□□ 0.33
C4BPAP04003 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 Z97205.2-201ENST00000564697 1639 ntBASIC17.14■□□□□ 0.33
C4BPAP04003 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C4BPAP04003 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
C4BPAP04003 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.14■□□□□ 0.33
C4BPAP04003 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.13■□□□□ 0.33
C4BPAP04003 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.13■□□□□ 0.33
C4BPAP04003 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.13■□□□□ 0.33
C4BPAP04003 RN7SL618P-201ENST00000477850 296 ntBASIC17.13■□□□□ 0.33
C4BPAP04003 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.13■□□□□ 0.33
C4BPAP04003 AC009407.1-201ENST00000568958 598 ntBASIC17.13■□□□□ 0.33
C4BPAP04003 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.13■□□□□ 0.33
C4BPAP04003 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.13■□□□□ 0.33
C4BPAP04003 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C4BPAP04003 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.13■□□□□ 0.33
C4BPAP04003 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.12■□□□□ 0.33
C4BPAP04003 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.12■□□□□ 0.33
C4BPAP04003 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
C4BPAP04003 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
C4BPAP04003 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
C4BPAP04003 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
C4BPAP04003 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.12■□□□□ 0.33
C4BPAP04003 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.12■□□□□ 0.33
C4BPAP04003 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
C4BPAP04003 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.12■□□□□ 0.33
C4BPAP04003 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.12■□□□□ 0.33
C4BPAP04003 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.12■□□□□ 0.33
C4BPAP04003 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.12■□□□□ 0.33
C4BPAP04003 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.12■□□□□ 0.33
C4BPAP04003 AC132872.4-202ENST00000622924 2756 ntBASIC17.12■□□□□ 0.33
C4BPAP04003 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
C4BPAP04003 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.12■□□□□ 0.33
C4BPAP04003 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.12■□□□□ 0.33
C4BPAP04003 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.12■□□□□ 0.33
C4BPAP04003 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C4BPAP04003 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.11■□□□□ 0.33
C4BPAP04003 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
C4BPAP04003 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4BPAP04003 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms