Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.2■□□□□ 0.5
SMC2O95347 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.2■□□□□ 0.5
SMC2O95347 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.2■□□□□ 0.5
SMC2O95347 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.2■□□□□ 0.5
SMC2O95347 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMC2O95347 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMC2O95347 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SMC2O95347 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMC2O95347 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SMC2O95347 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.19■□□□□ 0.5
SMC2O95347 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.19■□□□□ 0.5
SMC2O95347 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SMC2O95347 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMC2O95347 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMC2O95347 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.19■□□□□ 0.5
SMC2O95347 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 AC073439.1-201ENST00000624121 1774 ntBASIC18.19■□□□□ 0.5
SMC2O95347 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SMC2O95347 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMC2O95347 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMC2O95347 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 AC025580.3-201ENST00000617932 1424 ntBASIC18.18■□□□□ 0.5
SMC2O95347 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMC2O95347 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMC2O95347 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.18■□□□□ 0.5
SMC2O95347 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SMC2O95347 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 BCAR1-209ENST00000546196 1340 ntBASIC18.18■□□□□ 0.5
SMC2O95347 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.18■□□□□ 0.5
SMC2O95347 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMC2O95347 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.17■□□□□ 0.5
SMC2O95347 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.17■□□□□ 0.5
SMC2O95347 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.17■□□□□ 0.5
SMC2O95347 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMC2O95347 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMC2O95347 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms