Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLSTN1O94985 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CLSTN1O94985 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.85■□□□□ 0.45
CLSTN1O94985 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.85■□□□□ 0.45
CLSTN1O94985 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CLSTN1O94985 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.85■□□□□ 0.45
CLSTN1O94985 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CLSTN1O94985 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.85■□□□□ 0.45
CLSTN1O94985 GPX1P2-201ENST00000429271 606 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 SPDYE11-202ENST00000450699 704 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.85■□□□□ 0.45
CLSTN1O94985 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.85■□□□□ 0.45
CLSTN1O94985 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.85■□□□□ 0.45
CLSTN1O94985 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.85■□□□□ 0.45
CLSTN1O94985 RARRES2P8-201ENST00000566335 367 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 SPDYE9P-201ENST00000570642 692 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.85■□□□□ 0.45
CLSTN1O94985 SPDYE10P-202ENST00000612005 668 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 SPDYE8P-202ENST00000612377 668 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 AC008741.2-201ENST00000612792 3115 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.85■□□□□ 0.45
CLSTN1O94985 GGT4P-201ENST00000623672 1708 ntBASIC17.85■□□□□ 0.45
CLSTN1O94985 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLSTN1O94985 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.84■□□□□ 0.45
CLSTN1O94985 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CLSTN1O94985 WASH6P-202ENST00000359512 1437 ntBASIC17.84■□□□□ 0.45
CLSTN1O94985 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.84■□□□□ 0.45
CLSTN1O94985 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 RPS8P6-201ENST00000426177 609 ntBASIC17.84■□□□□ 0.45
CLSTN1O94985 AL671277.1-201ENST00000429656 993 ntBASIC17.84■□□□□ 0.45
CLSTN1O94985 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 MIR4469-201ENST00000583919 79 ntBASIC17.84■□□□□ 0.45
CLSTN1O94985 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 AC020765.3-201ENST00000613051 740 ntBASIC17.84■□□□□ 0.45
CLSTN1O94985 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLSTN1O94985 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.84■□□□□ 0.45
CLSTN1O94985 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLSTN1O94985 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLSTN1O94985 GGT3P-204ENST00000453783 1664 ntBASIC17.83■□□□□ 0.45
CLSTN1O94985 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.83■□□□□ 0.45
CLSTN1O94985 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.83■□□□□ 0.45
CLSTN1O94985 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLSTN1O94985 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLSTN1O94985 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLSTN1O94985 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.83■□□□□ 0.44
CLSTN1O94985 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms