Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6DO43924 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6DO43924 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
PDE6DO43924 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
PDE6DO43924 AC148477.4-201ENST00000613430 1793 ntBASIC12.49□□□□□ -0.41
PDE6DO43924 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6DO43924 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.49□□□□□ -0.41
PDE6DO43924 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
PDE6DO43924 KRT8P44-201ENST00000441609 1350 ntBASIC12.49□□□□□ -0.41
PDE6DO43924 LINC01568-207ENST00000641790 1380 ntBASIC12.49□□□□□ -0.41
PDE6DO43924 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.49□□□□□ -0.41
PDE6DO43924 TMA16-209ENST00000513272 803 ntTSL 2 BASIC12.49□□□□□ -0.41
PDE6DO43924 IGHV3-41-201ENST00000613121 348 ntBASIC12.49□□□□□ -0.41
PDE6DO43924 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
PDE6DO43924 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.49□□□□□ -0.41
PDE6DO43924 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 AJ011931.1-201ENST00000618749 2492 ntBASIC12.49□□□□□ -0.41
PDE6DO43924 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.49□□□□□ -0.41
PDE6DO43924 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
PDE6DO43924 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
PDE6DO43924 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.49□□□□□ -0.41
PDE6DO43924 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
PDE6DO43924 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.48□□□□□ -0.41
PDE6DO43924 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC12.48□□□□□ -0.41
PDE6DO43924 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 GCSHP5-201ENST00000443090 522 ntBASIC12.48□□□□□ -0.41
PDE6DO43924 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC12.48□□□□□ -0.41
PDE6DO43924 AC087641.1-201ENST00000557561 1021 ntBASIC12.48□□□□□ -0.41
PDE6DO43924 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.48□□□□□ -0.41
PDE6DO43924 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
PDE6DO43924 AC010331.1-201ENST00000611423 582 ntBASIC12.48□□□□□ -0.41
PDE6DO43924 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.48□□□□□ -0.41
PDE6DO43924 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
PDE6DO43924 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
PDE6DO43924 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms