Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 EEF1DP4-201ENST00000446006 880 ntBASIC14.3□□□□□ -0.12
TRAF3IP2O43734 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AL512356.2-201ENST00000546955 174 ntBASIC14.3□□□□□ -0.12
TRAF3IP2O43734 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AC105021.1-202ENST00000570572 669 ntBASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AC007967.4-201ENST00000614700 386 ntBASIC14.3□□□□□ -0.12
TRAF3IP2O43734 MIR6080-201ENST00000617359 66 ntBASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AC079781.4-201ENST00000641908 219 ntBASIC14.3□□□□□ -0.12
TRAF3IP2O43734 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 AC003101.2-201ENST00000612557 442 ntBASIC14.29□□□□□ -0.12
TRAF3IP2O43734 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.29□□□□□ -0.12
TRAF3IP2O43734 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAF3IP2O43734 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 AL139400.1-201ENST00000366220 510 ntBASIC14.28□□□□□ -0.12
TRAF3IP2O43734 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 SPDYE7P-202ENST00000420373 878 ntBASIC14.28□□□□□ -0.12
TRAF3IP2O43734 TSEN15P1-201ENST00000423257 515 ntBASIC14.28□□□□□ -0.12
TRAF3IP2O43734 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 HLA-J-203ENST00000494367 1087 ntBASIC14.28□□□□□ -0.12
TRAF3IP2O43734 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms