Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC087641.1-201ENST00000557561 1021 ntBASIC11.83□□□□□ -0.51
NACAE9PAV3 OR7E47P-204ENST00000575924 449 ntBASIC11.83□□□□□ -0.51
NACAE9PAV3 AL513190.1-201ENST00000621254 727 ntBASIC11.83□□□□□ -0.51
NACAE9PAV3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
NACAE9PAV3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
NACAE9PAV3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.83□□□□□ -0.52
NACAE9PAV3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NACAE9PAV3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.83□□□□□ -0.52
NACAE9PAV3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.83□□□□□ -0.52
NACAE9PAV3 REXO1L8P-201ENST00000604378 1897 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.83□□□□□ -0.52
NACAE9PAV3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NACAE9PAV3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 RNU1-129P-201ENST00000384064 167 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 AC254562.1-201ENST00000417586 456 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.83□□□□□ -0.52
NACAE9PAV3 AC092183.1-201ENST00000469884 875 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.83□□□□□ -0.52
NACAE9PAV3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.83□□□□□ -0.52
NACAE9PAV3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
NACAE9PAV3 AC005412.3-201ENST00000580309 715 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 U1.21-201ENST00000580816 167 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 AC068137.2-201ENST00000605408 478 ntBASIC11.83□□□□□ -0.52
NACAE9PAV3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.83□□□□□ -0.52
NACAE9PAV3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
NACAE9PAV3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NACAE9PAV3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.82□□□□□ -0.52
NACAE9PAV3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 RHOQP3-201ENST00000437982 621 ntBASIC11.82□□□□□ -0.52
NACAE9PAV3 AP006288.1-201ENST00000446065 395 ntBASIC11.82□□□□□ -0.52
NACAE9PAV3 AL513480.1-201ENST00000451731 511 ntBASIC11.82□□□□□ -0.52
NACAE9PAV3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 AC112482.1-201ENST00000492080 688 ntBASIC11.82□□□□□ -0.52
NACAE9PAV3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.82□□□□□ -0.52
NACAE9PAV3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 KRT19P2-202ENST00000557173 1012 ntBASIC11.82□□□□□ -0.52
NACAE9PAV3 PDPK2P-202ENST00000562415 1191 ntBASIC11.82□□□□□ -0.52
NACAE9PAV3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NACAE9PAV3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NACAE9PAV3 PCDHA3-202ENST00000532566 4594 ntBASIC11.82□□□□□ -0.52
NACAE9PAV3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.82□□□□□ -0.52
NACAE9PAV3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NACAE9PAV3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NACAE9PAV3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms