Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTAGE9A4FU28 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CTAGE9A4FU28 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTAGE9A4FU28 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTAGE9A4FU28 AC013726.1-201ENST00000563747 2285 ntBASIC17.21■□□□□ 0.34
CTAGE9A4FU28 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 LINC00528-201ENST00000600723 2160 ntBASIC17.2■□□□□ 0.34
CTAGE9A4FU28 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 AL359258.3-201ENST00000622910 2331 ntBASIC17.2■□□□□ 0.34
CTAGE9A4FU28 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
CTAGE9A4FU28 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 AGAP7P-201ENST00000582299 2062 ntBASIC17.19■□□□□ 0.34
CTAGE9A4FU28 AGAP14-201ENST00000624701 2060 ntBASIC17.19■□□□□ 0.34
CTAGE9A4FU28 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 UPK3BP1-201ENST00000428678 509 ntBASIC17.19■□□□□ 0.34
CTAGE9A4FU28 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 AC007191.1-201ENST00000623179 2995 ntBASIC17.19■□□□□ 0.34
CTAGE9A4FU28 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CTAGE9A4FU28 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTAGE9A4FU28 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTAGE9A4FU28 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.18■□□□□ 0.34
CTAGE9A4FU28 AC012569.1-201ENST00000591191 1524 ntBASIC17.18■□□□□ 0.34
CTAGE9A4FU28 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTAGE9A4FU28 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CTAGE9A4FU28 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms