Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SHISA3A0PJX4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 MROH4P-201ENST00000431302 1578 ntBASIC14□□□□□ -0.17
SHISA3A0PJX4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14□□□□□ -0.17
SHISA3A0PJX4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 PAN3-AS1-201ENST00000563843 1351 ntBASIC14□□□□□ -0.17
SHISA3A0PJX4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 AC127383.1-201ENST00000444697 1800 ntBASIC14□□□□□ -0.17
SHISA3A0PJX4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SHISA3A0PJX4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 NMU-205ENST00000511469 756 ntTSL 3 BASIC14□□□□□ -0.17
SHISA3A0PJX4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14□□□□□ -0.17
SHISA3A0PJX4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14□□□□□ -0.17
SHISA3A0PJX4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14□□□□□ -0.17
SHISA3A0PJX4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 DBP-204ENST00000599385 709 ntTSL 3 BASIC14□□□□□ -0.17
SHISA3A0PJX4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14□□□□□ -0.17
SHISA3A0PJX4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14□□□□□ -0.17
SHISA3A0PJX4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14□□□□□ -0.17
SHISA3A0PJX4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 AC073621.1-201ENST00000392730 636 ntBASIC13.99□□□□□ -0.17
SHISA3A0PJX4 AP002469.2-201ENST00000531724 424 ntBASIC13.99□□□□□ -0.17
SHISA3A0PJX4 OR7E47P-204ENST00000575924 449 ntBASIC13.99□□□□□ -0.17
SHISA3A0PJX4 MIR4515-201ENST00000584082 81 ntBASIC13.99□□□□□ -0.17
SHISA3A0PJX4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 ACTL9-202ENST00000612068 1252 ntBASIC13.99□□□□□ -0.17
SHISA3A0PJX4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SHISA3A0PJX4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms