Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.46□□□□□ -0.26
TRBV6-7A0A0A0MS04 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 CRYGEP-201ENST00000412192 528 ntBASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC092474.2-201ENST00000424288 719 ntBASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC096734.2-201ENST00000562054 433 ntBASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRBV6-7A0A0A0MS04 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 LINC00552-201ENST00000625151 2579 ntBASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 RHOQP3-201ENST00000437982 621 ntBASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC098831.1-202ENST00000438821 336 ntBASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC009947.1-201ENST00000444350 727 ntBASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 HCG4B-203ENST00000450128 991 ntBASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.44□□□□□ -0.26
TRBV6-7A0A0A0MS04 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms