Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 AP001889.1-201ENST00000525414 633 ntBASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 AL583810.1-201ENST00000553344 1045 ntBASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 AC120045.2-201ENST00000567334 178 ntBASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 ALOX12P2-203ENST00000570921 1945 ntBASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GTF2IRD1Q9UHL9 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 C1QBPP1-201ENST00000400117 770 ntBASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 AC099336.1-201ENST00000417053 1171 ntBASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 MIR4525-201ENST00000580000 75 ntBASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GTF2IRD1Q9UHL9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.49■□□□□ 0.39
GTF2IRD1Q9UHL9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.49■□□□□ 0.39
GTF2IRD1Q9UHL9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2IRD1Q9UHL9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.49■□□□□ 0.39
GTF2IRD1Q9UHL9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2IRD1Q9UHL9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GTF2IRD1Q9UHL9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.49■□□□□ 0.39
GTF2IRD1Q9UHL9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms