Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NLKQ9UBE8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NLKQ9UBE8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 GGT3P-204ENST00000453783 1664 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 PTCHD3P3-201ENST00000403073 906 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 KRT18P27-201ENST00000427733 1299 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 HNRNPDP1-201ENST00000439535 754 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 AC136632.2-201ENST00000512891 861 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 AC105339.3-201ENST00000560043 636 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 AL805961.1-202ENST00000641562 540 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 GRK6P1-201ENST00000400595 1711 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 AP003680.1-201ENST00000598970 3660 ntBASIC14.34□□□□□ -0.11
NLKQ9UBE8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NLKQ9UBE8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
NLKQ9UBE8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NLKQ9UBE8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NLKQ9UBE8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.33□□□□□ -0.11
NLKQ9UBE8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
NLKQ9UBE8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
NLKQ9UBE8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.33□□□□□ -0.11
NLKQ9UBE8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.33□□□□□ -0.11
NLKQ9UBE8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NLKQ9UBE8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NLKQ9UBE8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 PI4KAP1-204ENST00000612579 1703 ntBASIC14.33□□□□□ -0.12
NLKQ9UBE8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NLKQ9UBE8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NLKQ9UBE8 TERC-201ENST00000602385 541 ntBASIC14.33□□□□□ -0.12
NLKQ9UBE8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms