Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 AC091812.2-201ENST00000619081 385 ntBASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 AL512652.2-201ENST00000625156 1716 ntBASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00474Q9P2X8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AC023274.1-201ENST00000418278 595 ntBASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AL671277.1-201ENST00000429656 993 ntBASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 IGHV3-62-201ENST00000520057 340 ntBASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AL365330.1-201ENST00000607459 531 ntBASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 AL513190.1-201ENST00000621254 727 ntBASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
LINC00474Q9P2X8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
LINC00474Q9P2X8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms