Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH4Q9P003 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CNIH4Q9P003 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CNIH4Q9P003 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CNIH4Q9P003 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CNIH4Q9P003 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 AC142381.1-201ENST00000426099 345 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 GPS2P2-201ENST00000430745 888 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 CNN2P2-201ENST00000443536 909 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.07■□□□□ 0
CNIH4Q9P003 CNN2P3-201ENST00000450201 906 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 AC067863.1-201ENST00000494933 530 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 AC098859.1-201ENST00000502915 1238 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.07■□□□□ 0
CNIH4Q9P003 AC015911.4-201ENST00000588022 1070 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 SPTSSB-204ENST00000617024 1292 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 AL136317.3-201ENST00000618497 906 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 AC093028.1-201ENST00000622998 982 ntBASIC15.07■□□□□ 0
CNIH4Q9P003 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.07■□□□□ 0
CNIH4Q9P003 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.07■□□□□ 0
CNIH4Q9P003 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CNIH4Q9P003 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CNIH4Q9P003 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNIH4Q9P003 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.07■□□□□ 0
CNIH4Q9P003 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CNIH4Q9P003 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.06■□□□□ 0
CNIH4Q9P003 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
CNIH4Q9P003 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
CNIH4Q9P003 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
CNIH4Q9P003 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.06■□□□□ 0
CNIH4Q9P003 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.06■□□□□ 0
CNIH4Q9P003 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.06■□□□□ 0
CNIH4Q9P003 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 AC069262.1-201ENST00000539058 672 ntBASIC15.06■□□□□ 0
CNIH4Q9P003 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.06■□□□□ 0
CNIH4Q9P003 AC026150.2-201ENST00000564693 1156 ntBASIC15.06■□□□□ 0
CNIH4Q9P003 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.06■□□□□ 0
CNIH4Q9P003 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.06■□□□□ 0
CNIH4Q9P003 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CNIH4Q9P003 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.06■□□□□ 0
CNIH4Q9P003 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CNIH4Q9P003 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNIH4Q9P003 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.05■□□□□ 0
CNIH4Q9P003 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.05■□□□□ 0
CNIH4Q9P003 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.05■□□□□ 0
CNIH4Q9P003 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.05■□□□□ 0
CNIH4Q9P003 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH4Q9P003 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH4Q9P003 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH4Q9P003 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH4Q9P003 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH4Q9P003 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CNIH4Q9P003 HLA-H-201ENST00000383620 1096 ntBASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms