Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AL139010.1-201ENST00000454878 894 ntBASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 BANF1P1-201ENST00000553684 263 ntBASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 MIR4745-201ENST00000577608 62 ntBASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AL590560.3-201ENST00000623350 461 ntBASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SSBP3Q9BWW4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 AL079307.3-201ENST00000556114 283 ntBASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ME2P1-201ENST00000426028 1970 ntBASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 AL592424.1-201ENST00000563624 1536 ntBASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms