Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
PCGF1Q9BSM1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SNX33P1-201ENST00000592116 1762 ntBASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AC144831.1-201ENST00000573312 2656 ntBASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 HMGN1P19-201ENST00000436976 333 ntBASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AC105233.2-201ENST00000523697 349 ntBASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AF228730.5-201ENST00000530288 346 ntBASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 MIR6080-201ENST00000617359 66 ntBASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 AC092171.3-201ENST00000610122 2651 ntBASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PCGF1Q9BSM1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 AC067863.1-201ENST00000494933 530 ntBASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.54□□□□□ -0.24
PCGF1Q9BSM1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms