Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SNX18Q96RF0 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.72□□□□□ -0.05
SNX18Q96RF0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.71□□□□□ -0.05
SNX18Q96RF0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SNX18Q96RF0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.71□□□□□ -0.06
SNX18Q96RF0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SNX18Q96RF0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.71□□□□□ -0.06
SNX18Q96RF0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.71□□□□□ -0.06
SNX18Q96RF0 NORAD-201ENST00000565493 5339 ntBASIC14.71□□□□□ -0.06
SNX18Q96RF0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SNX18Q96RF0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SNX18Q96RF0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 HMGA1P7-201ENST00000406908 502 ntBASIC14.7□□□□□ -0.06
SNX18Q96RF0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 AC034105.1-201ENST00000563488 319 ntBASIC14.7□□□□□ -0.06
SNX18Q96RF0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SNX18Q96RF0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.7□□□□□ -0.06
SNX18Q96RF0 U82695.1-201ENST00000635752 1889 ntBASIC14.69□□□□□ -0.06
SNX18Q96RF0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms