Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 ALOX12P2-203ENST00000570921 1945 ntBASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 AC010319.3-201ENST00000597028 470 ntBASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC46A1Q96NT5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC46A1Q96NT5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms