Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PGBD1Q96JS3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.65■□□□□ 0.58
PGBD1Q96JS3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 AC003101.2-201ENST00000612557 442 ntBASIC18.65■□□□□ 0.58
PGBD1Q96JS3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PGBD1Q96JS3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PGBD1Q96JS3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PGBD1Q96JS3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PGBD1Q96JS3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.58
PGBD1Q96JS3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 HLA-H-201ENST00000383620 1096 ntBASIC18.64■□□□□ 0.57
PGBD1Q96JS3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 CYMP-203ENST00000474680 1263 ntBASIC18.64■□□□□ 0.57
PGBD1Q96JS3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 DUX4L27-201ENST00000554796 1261 ntBASIC18.64■□□□□ 0.57
PGBD1Q96JS3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 U82695.1-201ENST00000635752 1889 ntBASIC18.64■□□□□ 0.57
PGBD1Q96JS3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PGBD1Q96JS3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 FAM220BP-201ENST00000377689 816 ntBASIC18.63■□□□□ 0.57
PGBD1Q96JS3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 AL512356.2-201ENST00000546955 174 ntBASIC18.63■□□□□ 0.57
PGBD1Q96JS3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PGBD1Q96JS3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms