Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.1□□□□□ -0.15
TMEM54Q969K7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.1□□□□□ -0.15
TMEM54Q969K7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 HIST3H2BA-201ENST00000436555 524 ntBASIC14.1□□□□□ -0.15
TMEM54Q969K7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 AC015911.4-201ENST00000588022 1070 ntBASIC14.1□□□□□ -0.15
TMEM54Q969K7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 AL589739.1-201ENST00000607720 493 ntBASIC14.1□□□□□ -0.15
TMEM54Q969K7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 CETN4P-206ENST00000642099 2168 ntBASIC14.1□□□□□ -0.15
TMEM54Q969K7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 TUBB3P1-201ENST00000405796 1332 ntBASIC14.1□□□□□ -0.15
TMEM54Q969K7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMEM54Q969K7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.1□□□□□ -0.15
TMEM54Q969K7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.09□□□□□ -0.15
TMEM54Q969K7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 AC097359.3-201ENST00000603982 1210 ntBASIC14.09□□□□□ -0.15
TMEM54Q969K7 AC006538.3-201ENST00000612495 578 ntBASIC14.09□□□□□ -0.15
TMEM54Q969K7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TMEM54Q969K7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.09□□□□□ -0.15
TMEM54Q969K7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TMEM54Q969K7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TMEM54Q969K7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.15
TMEM54Q969K7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.08□□□□□ -0.15
TMEM54Q969K7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.08□□□□□ -0.15
TMEM54Q969K7 PAUPAR-201ENST00000630360 2965 ntBASIC14.08□□□□□ -0.16
TMEM54Q969K7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TMEM54Q969K7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms