Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
DNAAF1Q8NEP3 AL009178.2-201ENST00000597278 2719 ntBASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 AC012569.1-201ENST00000591191 1524 ntBASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 CICP13-201ENST00000422015 2789 ntBASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 KRT18P67-201ENST00000432816 1264 ntBASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 KRT18P56-201ENST00000507275 550 ntBASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
DNAAF1Q8NEP3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.21□□□□□ -0.14
DNAAF1Q8NEP3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 AC092919.2-201ENST00000623631 1645 ntBASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 UNC93B7-201ENST00000509439 705 ntBASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
DNAAF1Q8NEP3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNAAF1Q8NEP3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms