Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.7■□□□□ 0.1
HIPK4Q8NE63 AC064862.7-201ENST00000604520 867 ntBASIC15.7■□□□□ 0.1
HIPK4Q8NE63 AL139424.1-201ENST00000607572 797 ntBASIC15.7■□□□□ 0.1
HIPK4Q8NE63 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 AL358472.4-201ENST00000633140 710 ntBASIC15.7■□□□□ 0.1
HIPK4Q8NE63 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.7■□□□□ 0.1
HIPK4Q8NE63 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 KRT8P39-201ENST00000396270 1433 ntBASIC15.69■□□□□ 0.1
HIPK4Q8NE63 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 LINC01144-201ENST00000626198 1710 ntBASIC15.69■□□□□ 0.1
HIPK4Q8NE63 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.69■□□□□ 0.1
HIPK4Q8NE63 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIPK4Q8NE63 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 GPAA1P2-202ENST00000606848 1787 ntBASIC15.68■□□□□ 0.1
HIPK4Q8NE63 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 RBM17P3-201ENST00000417687 1192 ntBASIC15.68■□□□□ 0.1
HIPK4Q8NE63 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 KRT18P35-201ENST00000510488 1269 ntBASIC15.68■□□□□ 0.1
HIPK4Q8NE63 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.68■□□□□ 0.1
HIPK4Q8NE63 NKAPP1-205ENST00000585790 367 ntBASIC15.68■□□□□ 0.1
HIPK4Q8NE63 AC091076.1-201ENST00000610741 619 ntBASIC15.68■□□□□ 0.1
HIPK4Q8NE63 AL589182.2-201ENST00000619332 1049 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms