Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DNAAF3Q8N9W5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
DNAAF3Q8N9W5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
DNAAF3Q8N9W5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 TFAMP1-201ENST00000412727 736 ntBASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 AL355306.1-201ENST00000415580 579 ntBASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 KRT18P58-201ENST00000527480 1120 ntBASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 FAM86C2P-203ENST00000528684 1004 ntBASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DNAAF3Q8N9W5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 AL022342.1-201ENST00000400363 863 ntBASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 AC105233.2-201ENST00000523697 349 ntBASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 AF228730.5-201ENST00000530288 346 ntBASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.4■□□□□ 0.22
DNAAF3Q8N9W5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
DNAAF3Q8N9W5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
DNAAF3Q8N9W5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
DNAAF3Q8N9W5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.39■□□□□ 0.21
DNAAF3Q8N9W5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms