Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PAF1Q8N7H5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 AC025678.2-201ENST00000562061 970 ntBASIC16.56■□□□□ 0.24
PAF1Q8N7H5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 AC027612.4-201ENST00000605371 583 ntBASIC16.56■□□□□ 0.24
PAF1Q8N7H5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 LINC00628-201ENST00000628516 1289 ntBASIC16.56■□□□□ 0.24
PAF1Q8N7H5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PAF1Q8N7H5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 POU5F1P6-201ENST00000466990 990 ntBASIC16.55■□□□□ 0.24
PAF1Q8N7H5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 SPTSSB-204ENST00000617024 1292 ntBASIC16.55■□□□□ 0.24
PAF1Q8N7H5 MIR6080-201ENST00000617359 66 ntBASIC16.55■□□□□ 0.24
PAF1Q8N7H5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PAF1Q8N7H5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PAF1Q8N7H5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms