Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CROCCP3Q8IVE0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AP002414.1-201ENST00000391405 1147 ntBASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 MIR4651-201ENST00000582622 73 ntBASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AL138831.2-201ENST00000606564 490 ntBASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AL390719.2-201ENST00000606993 987 ntBASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AC010947.1-201ENST00000623454 693 ntBASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CROCCP3Q8IVE0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 STARP1-201ENST00000397973 869 ntBASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.61□□□□□ -0.07
CROCCP3Q8IVE0 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms