Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 HTR5BP-201ENST00000430851 1154 ntBASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 REXO1L1P-202ENST00000608646 1974 ntBASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPNE8Q86YQ8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 RPS8P6-201ENST00000426177 609 ntBASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AC004832.2-201ENST00000426397 482 ntBASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 C20orf181-201ENST00000623918 480 ntBASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 LINC02228-204ENST00000642115 2962 ntBASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPNE8Q86YQ8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 AC006486.2-201ENST00000624246 2199 ntBASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 AL109954.1-202ENST00000564051 2148 ntBASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 AP3S2-216ENST00000617003 1561 ntBASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE8Q86YQ8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms