Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.88□□□□□ -0.03
VRK2Q86Y07 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VRK2Q86Y07 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 PPT1-215ENST00000641471 2368 ntBASIC14.87□□□□□ -0.03
VRK2Q86Y07 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 ADH5P3-201ENST00000433842 1137 ntBASIC14.87□□□□□ -0.03
VRK2Q86Y07 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 POLD2P1-201ENST00000511220 997 ntBASIC14.87□□□□□ -0.03
VRK2Q86Y07 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 AC243562.1-201ENST00000560672 389 ntBASIC14.87□□□□□ -0.03
VRK2Q86Y07 AC040169.1-201ENST00000565382 521 ntBASIC14.87□□□□□ -0.03
VRK2Q86Y07 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 MST1L-201ENST00000442552 2185 ntBASIC14.87□□□□□ -0.03
VRK2Q86Y07 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK2Q86Y07 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK2Q86Y07 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 AC142381.1-201ENST00000426099 345 ntBASIC14.86□□□□□ -0.03
VRK2Q86Y07 KRT8P48-201ENST00000515599 1220 ntBASIC14.86□□□□□ -0.03
VRK2Q86Y07 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 FAM86C2P-203ENST00000528684 1004 ntBASIC14.86□□□□□ -0.03
VRK2Q86Y07 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 AC024267.1-201ENST00000582320 895 ntBASIC14.86□□□□□ -0.03
VRK2Q86Y07 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK2Q86Y07 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK2Q86Y07 AC136621.1-201ENST00000624017 2304 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms