Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 AC079140.1-201ENST00000508039 487 ntBASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP1BQ7LBR1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 KRT8P39-201ENST00000396270 1433 ntBASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 KRT18P32-201ENST00000424695 1287 ntBASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 PMS2P2-201ENST00000425039 1128 ntBASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 KRT8P48-201ENST00000515599 1220 ntBASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP1BQ7LBR1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CHMP1BQ7LBR1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms