Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 HTR5BP-201ENST00000430851 1154 ntBASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST2H3AQ71DI3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 AP000347.1-202ENST00000435868 847 ntBASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 ALG1L5P-201ENST00000482043 771 ntBASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 NORAD-201ENST00000565493 5339 ntBASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST2H3AQ71DI3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST2H3AQ71DI3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST2H3AQ71DI3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.15□□□□□ -0.15
HIST2H3AQ71DI3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST2H3AQ71DI3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms