Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 LINC01101-201ENST00000622953 1884 ntBASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00242Q5T6M2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 AC073621.1-201ENST00000392730 636 ntBASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 IGHV3-65-201ENST00000523210 341 ntBASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 AC112693.3-201ENST00000624819 1983 ntBASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 MYO15B-237ENST00000642007 4893 ntBASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 C18orf15-201ENST00000623680 2534 ntBASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00242Q5T6M2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AP001282.1-201ENST00000531301 1499 ntBASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 HMGA1P7-201ENST00000406908 502 ntBASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AP002469.2-201ENST00000531724 424 ntBASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00242Q5T6M2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms