Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.78□□□□□ -0.04
CLDN20P56880 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLDN20P56880 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.78□□□□□ -0.04
CLDN20P56880 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN20P56880 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN20P56880 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.78□□□□□ -0.04
CLDN20P56880 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN20P56880 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN20P56880 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN20P56880 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN20P56880 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLDN20P56880 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN20P56880 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.77□□□□□ -0.04
CLDN20P56880 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN20P56880 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.77□□□□□ -0.04
CLDN20P56880 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLDN20P56880 AC073347.1-201ENST00000421633 2643 ntBASIC14.77□□□□□ -0.04
CLDN20P56880 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 AC093724.1-201ENST00000448659 1027 ntBASIC14.77□□□□□ -0.05
CLDN20P56880 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN20P56880 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN20P56880 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CLDN20P56880 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CLDN20P56880 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CLDN20P56880 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN20P56880 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN20P56880 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN20P56880 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN20P56880 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN20P56880 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CLDN20P56880 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CLDN20P56880 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN20P56880 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms