Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC15.82■□□□□ 0.12
GTF2A1P52655 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.82■□□□□ 0.12
GTF2A1P52655 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.82■□□□□ 0.12
GTF2A1P52655 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.82■□□□□ 0.12
GTF2A1P52655 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.82■□□□□ 0.12
GTF2A1P52655 WWOX-216ENST00000569818 525 ntBASIC15.82■□□□□ 0.12
GTF2A1P52655 MIR4651-201ENST00000582622 73 ntBASIC15.82■□□□□ 0.12
GTF2A1P52655 AC112497.1-201ENST00000624824 639 ntBASIC15.82■□□□□ 0.12
GTF2A1P52655 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 AL591122.2-201ENST00000624125 1853 ntBASIC15.82■□□□□ 0.12
GTF2A1P52655 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.82■□□□□ 0.12
GTF2A1P52655 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GTF2A1P52655 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
GTF2A1P52655 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GTF2A1P52655 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GTF2A1P52655 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GTF2A1P52655 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
GTF2A1P52655 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.81■□□□□ 0.12
GTF2A1P52655 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.81■□□□□ 0.12
GTF2A1P52655 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
GTF2A1P52655 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GTF2A1P52655 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GTF2A1P52655 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.81■□□□□ 0.12
GTF2A1P52655 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.81■□□□□ 0.12
GTF2A1P52655 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.81■□□□□ 0.12
GTF2A1P52655 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.81■□□□□ 0.12
GTF2A1P52655 AL023803.3-201ENST00000615559 522 ntBASIC15.81■□□□□ 0.12
GTF2A1P52655 REXO1L10P-201ENST00000615707 1290 ntBASIC15.81■□□□□ 0.12
GTF2A1P52655 REXO1L12P-201ENST00000622156 912 ntBASIC15.81■□□□□ 0.12
GTF2A1P52655 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.81■□□□□ 0.12
GTF2A1P52655 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 AC015909.5-201ENST00000624336 2266 ntBASIC15.81■□□□□ 0.12
GTF2A1P52655 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.81■□□□□ 0.12
GTF2A1P52655 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GTF2A1P52655 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
GTF2A1P52655 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.81■□□□□ 0.12
GTF2A1P52655 AP001972.5-201ENST00000624624 2338 ntBASIC15.8■□□□□ 0.12
GTF2A1P52655 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.8■□□□□ 0.12
GTF2A1P52655 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GTF2A1P52655 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.8■□□□□ 0.12
GTF2A1P52655 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms