Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.34□□□□□ -0.11
CSNK1A1P48729 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK1A1P48729 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CSNK1A1P48729 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1A1P48729 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CSNK1A1P48729 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1A1P48729 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1A1P48729 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1A1P48729 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK1A1P48729 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.33□□□□□ -0.11
CSNK1A1P48729 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CSNK1A1P48729 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 AC008677.1-201ENST00000519230 1561 ntBASIC14.33□□□□□ -0.12
CSNK1A1P48729 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 AP3S2-216ENST00000617003 1561 ntBASIC14.33□□□□□ -0.12
CSNK1A1P48729 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK1A1P48729 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK1A1P48729 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 MIR1233-2-201ENST00000408138 82 ntBASIC14.32□□□□□ -0.12
CSNK1A1P48729 MIR1233-1-201ENST00000408722 82 ntBASIC14.32□□□□□ -0.12
CSNK1A1P48729 AC254562.1-201ENST00000417586 456 ntBASIC14.32□□□□□ -0.12
CSNK1A1P48729 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 AC004967.1-201ENST00000453589 447 ntBASIC14.32□□□□□ -0.12
CSNK1A1P48729 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 SNHG9-202ENST00000564014 471 ntBASIC14.32□□□□□ -0.12
CSNK1A1P48729 RARRES2P9-201ENST00000565168 469 ntBASIC14.32□□□□□ -0.12
CSNK1A1P48729 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK1A1P48729 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK1A1P48729 AC134684.3-201ENST00000641758 218 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms