Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RHPN1-AS1-201ENST00000518049 1918 ntBASIC10.76□□□□□ -0.69
PCP4P48539 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 FP325331.1-202ENST00000623531 1380 ntBASIC10.76□□□□□ -0.69
PCP4P48539 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.76□□□□□ -0.69
PCP4P48539 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
PCP4P48539 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
PCP4P48539 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC10.75□□□□□ -0.69
PCP4P48539 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
PCP4P48539 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 AC116351.2-201ENST00000606540 1585 ntBASIC10.75□□□□□ -0.69
PCP4P48539 HLA-V-202ENST00000446817 847 ntBASIC10.75□□□□□ -0.69
PCP4P48539 DYNLL1-208ENST00000550178 581 ntBASIC10.75□□□□□ -0.69
PCP4P48539 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC10.75□□□□□ -0.69
PCP4P48539 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC10.75□□□□□ -0.69
PCP4P48539 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 TNXB-203ENST00000451343 3125 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 ZIC4-217ENST00000525172 4152 ntTSL 2 BASIC10.75□□□□□ -0.69
PCP4P48539 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC10.75□□□□□ -0.69
PCP4P48539 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC10.75□□□□□ -0.69
PCP4P48539 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
PCP4P48539 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PCP4P48539 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC10.75□□□□□ -0.69
PCP4P48539 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 RPGRIP1-213ENST00000557771 3870 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 ANKRD20A7P-201ENST00000402318 2414 ntBASIC10.74□□□□□ -0.69
PCP4P48539 AC092802.1-201ENST00000421762 2447 ntTSL 2 BASIC10.74□□□□□ -0.69
PCP4P48539 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC10.74□□□□□ -0.69
PCP4P48539 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 ZSCAN31-201ENST00000344279 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
PCP4P48539 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PCP4P48539 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms