Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.94□□□□□ -0.02
LCN1P31025 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.94□□□□□ -0.02
LCN1P31025 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.94□□□□□ -0.02
LCN1P31025 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.93□□□□□ -0.02
LCN1P31025 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.93□□□□□ -0.02
LCN1P31025 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.93□□□□□ -0.02
LCN1P31025 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LCN1P31025 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.93□□□□□ -0.02
LCN1P31025 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.93□□□□□ -0.02
LCN1P31025 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.93□□□□□ -0.02
LCN1P31025 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.93□□□□□ -0.02
LCN1P31025 AC092865.5-201ENST00000545435 363 ntBASIC14.93□□□□□ -0.02
LCN1P31025 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.93□□□□□ -0.02
LCN1P31025 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.93□□□□□ -0.02
LCN1P31025 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
LCN1P31025 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.93□□□□□ -0.02
LCN1P31025 AC026979.3-201ENST00000607315 403 ntBASIC14.93□□□□□ -0.02
LCN1P31025 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.93□□□□□ -0.02
LCN1P31025 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LCN1P31025 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.93□□□□□ -0.02
LCN1P31025 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.93□□□□□ -0.02
LCN1P31025 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
LCN1P31025 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LCN1P31025 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 AC092364.2-201ENST00000596710 2692 ntBASIC14.92□□□□□ -0.02
LCN1P31025 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.92□□□□□ -0.02
LCN1P31025 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 KRT18P13-201ENST00000400056 1290 ntBASIC14.92□□□□□ -0.02
LCN1P31025 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.92□□□□□ -0.02
LCN1P31025 AC004461.1-201ENST00000412461 403 ntBASIC14.92□□□□□ -0.02
LCN1P31025 AL627223.1-201ENST00000416693 442 ntBASIC14.92□□□□□ -0.02
LCN1P31025 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 RNA5SP410-201ENST00000516285 106 ntBASIC14.92□□□□□ -0.02
LCN1P31025 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.92□□□□□ -0.02
LCN1P31025 SLC25A39P2-201ENST00000537614 270 ntBASIC14.92□□□□□ -0.02
LCN1P31025 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 AC008677.1-201ENST00000519230 1561 ntBASIC14.92□□□□□ -0.02
LCN1P31025 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 AC024909.3-201ENST00000611513 2257 ntBASIC14.92□□□□□ -0.02
LCN1P31025 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LCN1P31025 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.92□□□□□ -0.02
LCN1P31025 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.92□□□□□ -0.02
LCN1P31025 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LCN1P31025 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LCN1P31025 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LCN1P31025 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.91□□□□□ -0.02
LCN1P31025 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.91□□□□□ -0.02
LCN1P31025 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LCN1P31025 AL365209.1-201ENST00000624418 6473 ntBASIC14.91□□□□□ -0.02
LCN1P31025 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LCN1P31025 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms